Enum: SourceMaterialTypeEnum

URI: SourceMaterialTypeEnum

Permissible Values

Value	Meaning	Description
ADDITIONAL_METASTATIC	None
ADDITIONAL_NEW_PRIMARY	None
BENIGN_NEOPLASMS	None
BLOOD_DERIVED_CANCER_BONE_MARROW	None
BLOOD_DERIVED_CANCER_BONE_MARROW_POST_TREATMENT	None
BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD	None
BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD_POST_TREATMENT	None
BLOOD_DERIVED_LIQUID_BIOPSY	None
BLOOD_DERIVED_NORMAL	None
BONE_MARROW_NORMAL	None
BUCCAL_CELL_NORMAL	None
CELL_LINE_DERIVED_XENOGRAFT_TISSUE	None
CELL_LINES	None
CONTROL_ANALYTE	None
DNA	None
EBV_IMMORTALIZED_NORMAL	None
EXPANDED_NEXT_GENERATION_CANCER_MODEL	None
FFPE_RECURRENT	None
FFPE_SCROLLS	None
FIBROBLASTS_FROM_BONE_MARROW_NORMAL	None
GRANULOCYTES	None
HUMAN_TUMOR_ORIGINAL_CELLS	None
IN_SITU_NEOPLASMS	None
LYMPHOID_NORMAL	None
METASTATIC	None
MIXED_ADHERENT_SUSPENSION	None
MONONUCLEAR_CELLS_FROM_BONE_MARROW_NORMAL	None
NEOPLASMS_OF_UNCERTAIN_AND_UNKNOWN_BEHAVIOR	None
NEXT_GENERATION_CANCER_MODEL	None
NORMAL_ADJACENT_TISSUE	None
PLEURAL_EFFUSION	None
POST_NEOADJUVANT_THERAPY	None
PRIMARY_BLOOD_DERIVED_CANCER_BONE_MARROW	None
PRIMARY_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD	None
PRIMARY_TUMOR	None
PRIMARY_XENOGRAFT_TISSUE	None
RECURRENT_BLOOD_DERIVED_CANCER_BONE_MARROW	None
RECURRENT_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD	None
RECURRENT_TUMOR	None
RNA	None
SALIVA	None
SLIDES	None
SOLID_TISSUE_NORMAL	None
TOTAL_RNA	None
TUMOR	None
TUMOR_ADJACENT_NORMAL_POST_NEOADJUVANT_THERAPY	None
XENOGRAFT_TISSUE	None
NOT_ALLOWED_TO_COLLECT	None
NOT_REPORTED	None
UNKNOWN	None

Slots

Name	Description
source_material_type	The general kind of material from which the specimen was derived

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nhlbidatastage/bdchm

LinkML Source

name: SourceMaterialTypeEnum
from_schema: https://w3id.org/nhlbidatastage/bdchm
rank: 1000
permissible_values:
  ADDITIONAL_METASTATIC:
    text: ADDITIONAL_METASTATIC
  ADDITIONAL_NEW_PRIMARY:
    text: ADDITIONAL_NEW_PRIMARY
  BENIGN_NEOPLASMS:
    text: BENIGN_NEOPLASMS
  BLOOD_DERIVED_CANCER_BONE_MARROW:
    text: BLOOD_DERIVED_CANCER_BONE_MARROW
  BLOOD_DERIVED_CANCER_BONE_MARROW_POST_TREATMENT:
    text: BLOOD_DERIVED_CANCER_BONE_MARROW_POST_TREATMENT
  BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD:
    text: BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD
  BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD_POST_TREATMENT:
    text: BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD_POST_TREATMENT
  BLOOD_DERIVED_LIQUID_BIOPSY:
    text: BLOOD_DERIVED_LIQUID_BIOPSY
  BLOOD_DERIVED_NORMAL:
    text: BLOOD_DERIVED_NORMAL
  BONE_MARROW_NORMAL:
    text: BONE_MARROW_NORMAL
  BUCCAL_CELL_NORMAL:
    text: BUCCAL_CELL_NORMAL
  CELL_LINE_DERIVED_XENOGRAFT_TISSUE:
    text: CELL_LINE_DERIVED_XENOGRAFT_TISSUE
  CELL_LINES:
    text: CELL_LINES
  CONTROL_ANALYTE:
    text: CONTROL_ANALYTE
  DNA:
    text: DNA
  EBV_IMMORTALIZED_NORMAL:
    text: EBV_IMMORTALIZED_NORMAL
  EXPANDED_NEXT_GENERATION_CANCER_MODEL:
    text: EXPANDED_NEXT_GENERATION_CANCER_MODEL
  FFPE_RECURRENT:
    text: FFPE_RECURRENT
  FFPE_SCROLLS:
    text: FFPE_SCROLLS
  FIBROBLASTS_FROM_BONE_MARROW_NORMAL:
    text: FIBROBLASTS_FROM_BONE_MARROW_NORMAL
  GRANULOCYTES:
    text: GRANULOCYTES
  HUMAN_TUMOR_ORIGINAL_CELLS:
    text: HUMAN_TUMOR_ORIGINAL_CELLS
  IN_SITU_NEOPLASMS:
    text: IN_SITU_NEOPLASMS
  LYMPHOID_NORMAL:
    text: LYMPHOID_NORMAL
  METASTATIC:
    text: METASTATIC
  MIXED_ADHERENT_SUSPENSION:
    text: MIXED_ADHERENT_SUSPENSION
  MONONUCLEAR_CELLS_FROM_BONE_MARROW_NORMAL:
    text: MONONUCLEAR_CELLS_FROM_BONE_MARROW_NORMAL
  NEOPLASMS_OF_UNCERTAIN_AND_UNKNOWN_BEHAVIOR:
    text: NEOPLASMS_OF_UNCERTAIN_AND_UNKNOWN_BEHAVIOR
  NEXT_GENERATION_CANCER_MODEL:
    text: NEXT_GENERATION_CANCER_MODEL
  NORMAL_ADJACENT_TISSUE:
    text: NORMAL_ADJACENT_TISSUE
  PLEURAL_EFFUSION:
    text: PLEURAL_EFFUSION
  POST_NEOADJUVANT_THERAPY:
    text: POST_NEOADJUVANT_THERAPY
  PRIMARY_BLOOD_DERIVED_CANCER_BONE_MARROW:
    text: PRIMARY_BLOOD_DERIVED_CANCER_BONE_MARROW
  PRIMARY_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD:
    text: PRIMARY_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD
  PRIMARY_TUMOR:
    text: PRIMARY_TUMOR
  PRIMARY_XENOGRAFT_TISSUE:
    text: PRIMARY_XENOGRAFT_TISSUE
  RECURRENT_BLOOD_DERIVED_CANCER_BONE_MARROW:
    text: RECURRENT_BLOOD_DERIVED_CANCER_BONE_MARROW
  RECURRENT_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD:
    text: RECURRENT_BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD
  RECURRENT_TUMOR:
    text: RECURRENT_TUMOR
  RNA:
    text: RNA
  SALIVA:
    text: SALIVA
  SLIDES:
    text: SLIDES
  SOLID_TISSUE_NORMAL:
    text: SOLID_TISSUE_NORMAL
  TOTAL_RNA:
    text: TOTAL_RNA
  TUMOR:
    text: TUMOR
  TUMOR_ADJACENT_NORMAL_POST_NEOADJUVANT_THERAPY:
    text: TUMOR_ADJACENT_NORMAL_POST_NEOADJUVANT_THERAPY
  XENOGRAFT_TISSUE:
    text: XENOGRAFT_TISSUE
  NOT_ALLOWED_TO_COLLECT:
    text: NOT_ALLOWED_TO_COLLECT
  NOT_REPORTED:
    text: NOT_REPORTED
  UNKNOWN:
    text: UNKNOWN