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Class: DimensionalObservationSet

A set of one or more discrete observations about the physical dimensions of an object (e.g. length, width, area).

URI: bdchm:DimensionalObservationSet

classDiagram class DimensionalObservationSet Entity <|-- DimensionalObservationSet DimensionalObservationSet : category DimensionalObservationSet : id DimensionalObservationSet : method_type DimensionalObservationSet : observations DimensionalObservationSet --> DimensionalObservation : observations

Inheritance

  • Entity
    • DimensionalObservationSet

Slots

Name Cardinality and Range Description Inheritance
category 0..1
String
The general category of observation set described direct
method_type 0..*
String
A type of method used in generating each of the Observations bundled in the s... direct
observations 0..*
DimensionalObservation
A set of one or more more atomic observations that are conceptually or logica... direct
id 1..1
Uriorcurie
The 'logical' identifier of the entity within the system of record Entity

Usages

used by used in type used
Specimen dimensional_measures range DimensionalObservationSet

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nhlbidatastage/bdchm

Mappings

Mapping Type Mapped Value
self bdchm:DimensionalObservationSet
native bdchm:DimensionalObservationSet

LinkML Source

Direct

name: DimensionalObservationSet
description: A set of one or more discrete observations about the physical dimensions
  of an object (e.g. length, width, area).
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
attributes:
  category:
    name: category
    description: The general category of observation set described
    comments:
    - FHIR naming conventions are followed here, where 'id' is used for logical identifiers
      which are unique only within a given system, and 'identifier' for business identifiers,
      which are used to connect entities or share content across systems.  The complex
      'Identifier' data type is used  to capture the identifier itself, along with
      metadata about its source.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    values_from:
    - crdch:enum_CRDCH_DimensionalObservationSet_category
    multivalued: false
    range: string
    required: false
  method_type:
    name: method_type
    description: A type of method used in generating each of the Observations bundled
      in the set.
    comments:
    - This may be a type of observational, measurement, experimental, or computational
      method specifying how to generate data (e.g. 'manual counting', 'bright field
      microscopy'). Or a Guideline or SOP specifying how to interpret data and/or
      encode the result of an  Observation (e.g. a Cancer Staging system such as that
      defined by the AJCC, or variant interpretation guideline such as that provided
      by the ACMG).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    values_from:
    - crdch:enum_CRDCH_DimensionalObservationSet_method_type
    multivalued: true
    range: string
    required: false
  observations:
    name: observations
    description: A set of one or more more atomic observations that are conceptually
      or logically related - e.g. two components of some compound measurement (e.g.
      the systolic and diastolic components of a blood pressure measurement), or a
      panel of related measurements run and interpreted together on the same subject/specimen
      (e.g. a blood panel, or separate dimensional measurements of a specimen).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    multivalued: true
    range: DimensionalObservation
    required: false
    inlined: true
    inlined_as_list: true

Induced

name: DimensionalObservationSet
description: A set of one or more discrete observations about the physical dimensions
  of an object (e.g. length, width, area).
from_schema: https://w3id.org/nhlbidatastage/bdchm
is_a: Entity
attributes:
  category:
    name: category
    description: The general category of observation set described
    comments:
    - FHIR naming conventions are followed here, where 'id' is used for logical identifiers
      which are unique only within a given system, and 'identifier' for business identifiers,
      which are used to connect entities or share content across systems.  The complex
      'Identifier' data type is used  to capture the identifier itself, along with
      metadata about its source.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    values_from:
    - crdch:enum_CRDCH_DimensionalObservationSet_category
    multivalued: false
    alias: category
    owner: DimensionalObservationSet
    domain_of:
    - DimensionalObservation
    - DimensionalObservationSet
    range: string
    required: false
  method_type:
    name: method_type
    description: A type of method used in generating each of the Observations bundled
      in the set.
    comments:
    - This may be a type of observational, measurement, experimental, or computational
      method specifying how to generate data (e.g. 'manual counting', 'bright field
      microscopy'). Or a Guideline or SOP specifying how to interpret data and/or
      encode the result of an  Observation (e.g. a Cancer Staging system such as that
      defined by the AJCC, or variant interpretation guideline such as that provided
      by the ACMG).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    values_from:
    - crdch:enum_CRDCH_DimensionalObservationSet_method_type
    multivalued: true
    alias: method_type
    owner: DimensionalObservationSet
    domain_of:
    - DimensionalObservation
    - DimensionalObservationSet
    - SpecimenQualityObservation
    - SpecimenQuantityObservation
    - SpecimenProcessingActivity
    - SpecimenStorageActivity
    range: string
    required: false
  observations:
    name: observations
    description: A set of one or more more atomic observations that are conceptually
      or logically related - e.g. two components of some compound measurement (e.g.
      the systolic and diastolic components of a blood pressure measurement), or a
      panel of related measurements run and interpreted together on the same subject/specimen
      (e.g. a blood panel, or separate dimensional measurements of a specimen).
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    multivalued: true
    alias: observations
    owner: DimensionalObservationSet
    domain_of:
    - DimensionalObservationSet
    range: DimensionalObservation
    required: false
    inlined: true
    inlined_as_list: true
  id:
    name: id
    description: The 'logical' identifier of the entity within the system of record.  The
      simple value of this attribute stands for an identifier of this data object
      within the system, it can be used as a reference from other objects within the
      same system (i.e. primary and foreign keys), and it should be unique per type
      of object. The same data object copied to a different system will likely have
      a different "id" in the new system since "id" values are system specific and
      do not represent persistent business identifiers. Business identifiers are assigned
      outside the information system and are captured in the "identifier" field. The
      "id" field is more likely to be a serially or randomly generated value that
      is assigned to the data object as it is created in a system.
    from_schema: https://w3id.org/nhlbidatastage/bdchm
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: DimensionalObservationSet
    domain_of:
    - Entity
    range: uriorcurie
    required: true